BAMMtools (version 2.1.11)

Analysis and Visualization of Macroevolutionary Dynamics on Phylogenetic Trees

Description

Provides functions for analyzing and visualizing complex macroevolutionary dynamics on phylogenetic trees. It is a companion package to the command line program BAMM (Bayesian Analysis of Macroevolutionary Mixtures) and is entirely oriented towards the analysis, interpretation, and visualization of evolutionary rates. Functionality includes visualization of rate shifts on phylogenies, estimating evolutionary rates through time, comparing posterior distributions of evolutionary rates across clades, comparing diversification models using Bayes factors, and more.

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Install

install.packages('BAMMtools')

Monthly Downloads

1,561

Version

2.1.11

License

GPL (>= 2)

Maintainer

Last Published

December 19th, 2023

Functions in BAMMtools (2.1.11)