RDocumentation
Moon
Learn R
Search all packages and functions
adehabitat (version 1.8.20)
Analysis of Habitat Selection by Animals
Description
A collection of tools for the analysis of habitat selection by animals.
Copy Link
Copy
Link to current version
Version
Version
1.8.20
1.8.19
1.8.18
1.8.17
1.8.15
1.8.14
1.8.13
1.8.12
1.8.11
1.8.10
1.8.9
1.8.7
1.8.6
1.8.5
1.8.4
1.8.3
1.8.2
1.8.1
1.8.0
1.7.3
1.7.2
1.7.1
1.6-2
1.6-1
1.5-3
1.5-2
1.5-1
1.4-1
1.3
1.2-1
1.1-1
Down Chevron
Install
install.packages('adehabitat')
Monthly Downloads
485
Version
1.8.20
License
GPL (>= 2)
Maintainer
Clement Calenge
Last Published
January 28th, 2018
Functions in adehabitat (1.8.20)
Search functions
as.kasc
Working with Several Raster Maps
as.ltraj
Working with Trajectories in 2D Space: the Class ltraj
angles
Compute Turning Angles - Deprecated
area2asc
Converts a Polygon to Raster
asc2im
Conversion of Maps of Class 'asc' and 'im' (Package spatstat)
ascgen
Creation of Raster Maps
adehabitat-package
adehabitat: a Package for the Analysis of the Space Use by Animals
albatross
Argos Monitoring of Adult Albatross Movement
bighorn
Radio-Tracking of Bighorn Sheeps
biv.test
Bivariate Test
bauges
Census of chamois (Rupicapra rupicapra) in the Bauges mountains
bear
GPS monitoring of one brown bear
compana
Compositional Analysis of Habitat Use
convnum
Conversion from Factor to Numeric for Raster Map
Chi
The Chi Distribution
Extract.ltraj
Extract or Replace Parts of an Object of Class ltraj
count.points.id
Number of Points in Each Pixel of a Raster Map
buffer
Compute Buffers
burst
ID and Bursts of an Object of Class ltraj
clusthr
Estimation of Home Range by Clustering
colasc
Creates a Vector of Colors for a Raster Map of Type 'factor'
explore.kasc
Interactive Exploration of Maps of Class kasc (requires the package tkrplot)
findmaxasc
Find Local Maxima on a Map of Class 'asc'
cutltraj
Split Trajectories into Several Bursts
hist.ltraj
Histogram of the Descriptive Parameters of a Trajectory
distfacmap
Compute distances to the different levels of a factor map
area2dxf
Exportation of Areas
as.area
Objects of Class "area"
as.sahrlocs
Exploratory Analysis of Habitat Selection
as.traj
Working with Trajects in 2D Space
getcontour
Computes the Contour Polygon of a Raster Object
gnesfa
General Niche-Environment System Factor Analysis
capreotf
GPS Monitoring of one Roe Deer in Trois-Fontaines (France)
chamois
Location of Chamois Groups in the Chartreuse Mountains
domain
Estimation of the Potential Distribution of a Species
getXYcoords
Computes the X and Y Coordinates of the Pixels of a Raster Map
getascattr
Copy the Attributes of an Object of Class 'asc' or 'kasc' to another Object
enfa
Ecological Niche Factor Analysis
engen2008II
Measuring Habitat Selection Using the Method of Engen et al. (2008)
c.ltraj
Combine Bursts of Relocations in Objects of Class "ltraj"
capreochiz
GPS Monitoring of one Roe Deer in Chize (France)
ibex
GPS Monitoring of Four Ibex in the Belledonne Mountain
ibexraw
GPS Monitoring of Four Ibex in the Belledonne Mountain (irregular data)
dunnfa
Factorial Analysis of the Specialization in Habitat Selection Studies. Unpublished Work of James Dunn (University of Arkansas)
eisera
Eigenanalysis of Selection Ratios
hbrown
Estimates the value of h for a Brownian motion
image.asc
Displays a Color Image of a Matrix of Class 'asc'
image.sahrlocs
Graphical Display of the Habitat Composition of the Home Ranges of Animals Monitored Using Radio-Tracking
fpt
Computation of the First Passage Time From Trajectories
gdltraj
Working with Trajectories: Specify a Time Period
hr.rast
Rasterisation of Objects of Class 'area'
hseal
Argos Monitoring of Hooded Seal
import.asc
Arcview ASCII Raster File Importation And Exportation
histniche
Histograms of the Ecological Niche
indmove
Testing Independence in Regular Trajectory Parameters
is.regular
Regular Trajectories
is.sd
Handling of Trajectories of the Same Duration
lowres
Reducing the Resolution of a Map
lynxjura
Monitoring of Lynx
predict.enfa
Habitat Suitability Maps Built from the ENFA
kver
Handling of Objects of Class kver
labcon
Labelling Connected Features
puech
Radio-Tracking Data of Wild Boar (2)
rand.kselect
Test of the Third-Order Habitat Selection
hist.kasc
Histograms of Mapped Variables
kasc2spixdf
Conversion of maps from/to the package "sp"
kernelUD
Estimation of Kernel Home-Range
mouflon
GPS Monitoring of One Mouflon in the Caroux Mountain
niche.test
Monte-Carlo Test on Parameters of the Ecological Niche
kernelbb
Estimation of Kernel Brownian Bridge Home-Range
kernelkc
Kernel Smoothing in Space and Time of the Animals' Use of Space
managNAkasc
"Cleaning" Objects of Class 'kasc'
mcp
Estimation of the Home Range Using the Minimum Convex Polygon Estimator
plotltr
Changes in Traject Parameters Over Time
porpoise
Argos monitoring of Porpoise Movements
join.asc
Finds the Value of Mapped Variables at some Specified Locations (Spatial Join)
kasc2df
Conversion of Objects of Class kasc
modpartltraj
Segmentation of a trajectory based on Markov models
morphology
Morphology: Erosion or Dilatation of Features on a Raster Map
offsetdate
Date Handling in an Object of Class 'ltraj'
perarea
Compute Areas and Perimeters of Objects of Class "area"
kerneloverlap
Spatial Interaction between Animals Monitored Using Radio-Tracking
kselect
K-Select Analysis: a Method to Analyse the Habitat Selection by Animals
mcp.rast
Converts a Polygon to Raster
mindistkeep
Detecting Absence of Movement in an Object of Class 'ltraj'
plot.ltraj
Graphical Display of an Object of Class "ltraj"
plot.sahrlocs
Exploratory Analysis of Habitat Selection
rupicabau
GPS Monitoring of One Chamois in the Bauges Mountains
sahrlocs2kselect
Preparation of K-Select Analysis
redisltraj
Rediscretization of a Trajectory With Regular Step Length
rotxy
Internal Functions for Package 'adehabitat'
setmask
Applies a Mask on Objects of Class 'asc' or 'kasc'
sett0
Round the Timing of Collection of Relocations to Obtain Regular Trajectory
pheasant
Radio-Tracking of Pheasants
plot.area
Graphical Display of Objects of Class "area"
sahrlocs2niche
OMI Analysis of Radio-Tracking Data
scatter.enfa
Scatter Plot of the Results of the ENFA
simm.levy
Simulates a Levy Walk
simm.mba
Simulation of an Arithmetic Brownian Motion
puechabon
Radio-Tracking Data of Wild Boar
puechcirc
Movements of wild boars tracked at Puechabon
randtest.enfa
Randomisation Test for the Ecological Niche Factor Analysis
runsNAltraj
Highlighting the Patterns in Missing Values in Trajects
typeII2typeI
Change the Type of a Trajectory
madifa
The MADIFA: a Factorial Decomposition of the Mahalanobis Distances
mahasuhab
Habitat Suitability Mapping with Mahalanobis Distances.
puechdesIII
Habitat Selection by the Wild Boar at Puechabon
simm.brown
Simulate a Bivariate Brownian Motion
simm.crw
Simulation of a Correlated Random Walk
which.ltraj
Identify Relocations Fullfilling a Condition in an Object of Class "ltraj"
wi
Computation of Selection Ratios for Habitat Selection Studies.
scatterniche
Display the Niche in the Ecological Space
vanoise
Habitat Use by Three Species of Galliformes in the Vanoise National Parc
qqchi
Quantile-Quantile Plots for Trajectories of Class 'ltraj'
set.limits
Define the Same Time Limits for several Bursts in a Regular Trajectory
setNA
Place Missing Values in Objects of Class 'ltraj'
schoener
Compute Schoener's ratio
speed
Computes the Speed Between Successive Relocations of an Animal - Deprecated
squirrel
Radio-Tracking Data of Squirrels
subsample
Subsample a Trajectory
simm.mou
Simulation of a Bivariate Ornstein-Uhlenbeck Process
sliwinltr
Apply a Function on an Object of Class "ltraj", Using a Sliding Window
simm.bb
Brownian bridge motion
squirreloc
Radio-tracking of squirrels
wawotest
Wald-Wolfowitz Test of Randomness
whale
Argos Monitoring of Whale Movement
storemapattr
Store Attributes of Maps of Class asc and kasc
teal
Teal (Anas crecca) Ring Recovery Dataset
trajdyn
Interactive Display of Objects of Class 'ltraj'
subsetmap
Storing a Part of a Map