adhoc (version 1.1)

Calculate Ad Hoc Distance Thresholds for DNA Barcoding Identification

Description

Two functions to calculate intra- and interspecific pairwise distances, evaluate DNA barcoding identification error and calculate an ad hoc distance threshold for each particular reference library of DNA barcodes. Specimen identification at this ad hoc distance threshold (using the best close match method) will produce identifications with an estimated relative error probability that can be fixed by the user (e.g. 5%).

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Install

install.packages('adhoc')

Monthly Downloads

28

Version

1.1

License

GPL (>= 2)

Maintainer

Last Published

March 17th, 2017

Functions in adhoc (1.1)