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affycomp (version 1.48.0)
Graphics Toolbox for Assessment of Affymetrix Expression Measures
Description
The package contains functions that can be used to compare expression measures for Affymetrix Oligonucleotide Arrays.
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Version
Version
1.48.0
1.46.0
1.44.0
1.42.0
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Version
1.48.0
License
GPL (>= 2)
Maintainer
Rafael A Irizarry
Last Published
January 1st, 1970
Functions in affycomp (1.48.0)
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affycomp.compfigs.auxiliary
Auxiliary functions to create comparitive Figures
affycomp.figures.auxiliary
Auxiliary functions to create Figures
assessSpikeIn
Assessment functions for Spike In Data
exprset.log
Take log base 2 of Expression
hgu133a.spikein.phenodata
phenotypic information for HGU133A spike in study
assessSD
SD Assessment functions
assessAll
Assessment functions
assessDilution
Assessment functions for Dilution Data
spikein.phenodata
phenotypic information for spike in study
assessSpikeIn2
New Assessment functions for Spike In Data
dilution.phenodata
Phenotypic Information for Dilution Study
remove.hgu133a.xhyb
Remove crosshybridizers
hgu133a.spikein.xhyb
Cross hybridizers
SD
SD Assessment Functions
affycompTable
Expression Assessment Table
affycompPlot
Assessment Plots
mas5.assessment
Example of the result of assessments
readin
Read Expression Date Sets