Comparisons of Effect Sizes from Modularity Analyses
Comparisons of Effect Sizes from Overall Integration Analyses
Comparing net rates of evolution among traits on phylogenies
Comparing net rates of shape evolution on phylogenies
Comparisons of Phylogenetic Signal Effect Sizes
Build 3D surface template
Analysis of bilateral symmetry
Combine separate landmark configurations
Comparisons of Effect Sizes from Partial Least Squares
Convert landmark data matrix into array (p x k x n)
Subset landmark coordinates via a factor
Select points to "slide" along curves
Digitize 2D landmarks on .jpg files
Define modules (landmark partitions)
Digitize 3D landmarks on mesh3d object
Estimate locations of missing landmarks
Edit 3D template
Define links between landmarks
Calculate semilandmarks along a curve
Digitize 3D fixed landmarks and surface semilandmarks
Identify specimen closest to the mean of a set of Procrustes shape variables
Principal and phylogenetically-aligned components analysis of shape data
Rotate a subset of 2D landmarks to common articulation angle
Generalized Procrustes analysis of points, curves, and surfaces
Landmark data from hummingbird bills (includes sliding semilandmarks on curves)
Set up parameters for grids, points, and links in plotRefToTarget
Quantify global integration relative to self-similarity
This function is a wrapper for the function measurement.error in RRPP
Quantify integration in a set of traits
Geometric morphometric analyses for 2D/3D data
Dorsal head shape data of lizards
Create a data frame with shape data
Landmarks on mosquito wings
Evaluate the degree of modular signal in shape data
Estimate mean shape for a set of aligned specimens
Quantify morphological integration between modules
Morphological disparity for one or more groups of specimens
Convert geomorph plots to ggplot objects
Head shape and phylogenetic relationships for several Plethodon salamander species
Quantify phylogenetic morphological integration between two or more sets of variables under Brownian motion
Head and tail shapes of larval salamanders
na.omit.geomorph.data.frame
Handle missing values in rrpp.data.frame objects
Assessing phylogenetic signal effect size in Procrustes shape variables
Plot Function for geomorph
Pick points in geomorph scatterplots to visualize shape variation
Calculate linear distances between landmarks
Landmark data from Plethodon salamander heads
Head shape and food use data from Plethodon salamanders
Plot Function for geomorph
Plot Function for geomorph
Plot Function for geomorph
Plot Function for geomorph
Plot Function for geomorph
Plot Function for geomorph
Plot Function for geomorph
Plot Function for geomorph
Plotting to assist visualization of shape-size covariation (allometry)
Plot landmark coordinates for all specimens
Assessing phylogenetic signal in Procrustes shape variables
Plot Function for geomorph
Plot 3D specimen, fixed landmarks and surface semilandmarks
Print/Summary Function for geomorph
Print/Summary Function for geomorph
Print/Summary Function for geomorph
Plot Function for geomorph
Print/Summary Function for geomorph
Find potential outliers
Evaluate the degree of phylogenetic modular signal in Procrustes shape variables
Print/Summary function for geomorph
Print/Summary Function for geomorph
Print/Summary Function for geomorph
Print/Summary Function for geomorph
Print/Summary function for geomorph
Plot shape differences between a reference and target specimen
Read landmark data matrix from fcsv file
Print/Summary Function for geomorph
Read mesh data (vertices and faces) from ply files
Procrustes ANOVA/regression for Procrustes shape variables
Print/Summary Function for geomorph
Print/Summary Function for geomorph
Print/Summary Function for geomorph
Read landmark data from tps file
Print/Summary Function for geomorph
Print/Summary Function for geomorph
Print/Summary function for geomorph
Read and combine multiple nts files
Convert (p x k x n) data array into 2D data matrix
Print/Summary Function for geomorph
Print/Summary Function for geomorph
Two-block partial least squares analysis for Procrustes shape variables
Shape prediction from numeric predictors
Landmark data from dataset rat
Read landmark data from Morphologika file(s)
Print/Summary Function for geomorph
Creates a mesh3d object warped to the mean shape
Print/Summary Function for geomorph
Print/Summary Function for geomorph
Update Plots with Convex Hulls for Groups
Read landmark data matrix from nts file
Read and combine multiple tps files
Rotate or flip landmark or coordinate configurations
Print/Summary Function for geomorph
Read landmark data from a shapes object (StereoMorph)
print.compare.physignal.z
Print/Summary Function for geomorph
Print/Summary Function for geomorph
Print/Summary Function for geomorph
Creates a 2D outline warped to the mean shape
summary.compare.physignal.z
Print/Summary Function for geomorph
Print/Summary Function for geomorph
summary.morphol.disparity
Print/Summary Function for geomorph
Print/Summary Function for geomorph
Write landmark data to tps file
Print/Summary Function for geomorph
Phylogenetic ANOVA/regression for Procrustes shape variables
Print/Summary Function for geomorph
Print/Summary Function for geomorph
Landmarks on pupfish
Print/Summary Function for geomorph
Print/Summary Function for geomorph
3D scan of a scallop shell from a .ply file in mesh3d format
Print/Summary Function for geomorph
Landmark data from scallop shells
Print/Summary Function for geomorph