iC10TrainingData (version 1.3.1)

Training Datasets for iC10 Package

Description

Training datasets for iC10; which implements the classifier described in the paper 'Genome-driven integrated classification of breast cancer validated in over 7,500 samples' (Ali HR et al., Genome Biology 2014). It uses copy number and/or expression form breast cancer data, trains a pamr classifier (Tibshirani et al.) with the features available and predicts the iC10 group. Genomic annotation for the training dataset has been obtained from Mark Dunning's lluminaHumanv3.db package.

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Install

install.packages('iC10TrainingData')

Monthly Downloads

383

Version

1.3.1

License

GPL-3

Maintainer

Last Published

August 24th, 2018

Functions in iC10TrainingData (1.3.1)