plsgenomics (version 1.5-2.1)

PLS Analyses for Genomics

Description

Routines for PLS-based genomic analyses, implementing PLS methods for classification with microarray data and prediction of transcription factor activities from combined ChIP-chip analysis. The >=1.2-1 versions include two new classification methods for microarray data: GSIM and Ridge PLS. The >=1.3 versions includes a new classification method combining variable selection and compression in logistic regression context: logit-SPLS; and an adaptive version of the sparse PLS.

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Install

install.packages('plsgenomics')

Monthly Downloads

478

Version

1.5-2.1

License

GPL (>= 2)

Maintainer

Last Published

November 27th, 2023

Functions in plsgenomics (1.5-2.1)