Models for Data from Unmarked Animals
Create an unmarkedFrame, or one of its child classes.
constructor of unmarkedFitList objects
Compute the penalty weight for the MPLE penalized likelihood method
Methods for Function ranef in Package unmarked
Methods for Function confint in Package `unmarked'
Mallard count data
Swiss landscape data
Fit the occupancy model of Royle and Nichols (2003)
Massachusetts North American Amphibian Monitoring Program Data
BBS Point Count and Occurrence Data from 2 Bird Species
Fit the dynamic occupancy model of MacKenzie et. al (2003)
Fit the N-mixture model of Royle (2004)
Bin distance data
Fit the open N-mixture models of Dail and Madsen and extensions
Methods for Function simulate in Package `unmarked'
Methods for Function SE in Package `unmarked'
Detection/non-detection data on the European crossbill (Loxia
curvirostra )
Create an unmarkedMultFrame, unmarkedFrameGMM, unmarkedFrameGDS,
or unmarkedFrameGPC object
Compute Sum of Squared Residuals for a Model Fit.
Multinomial-Poisson Mixtures Model
2001 Delaware North American Amphibian Monitoring Program Data
A function to impute missing entries in continuous obsCovs
Class "unmarkedEstimate"
Landscape data for Santa Cruz Island
Organize data for the multinomial-Poisson mixture model of Royle (2004)
fit by multinomPois
Fit the MacKenzie et al. (2002) Occupancy Model with the penalized likelihood methods of Hutchinson et al. (2015) using cross-validation
Fit the MacKenzie et al. (2002) Occupancy Model
Distance-sampling detection functions and associated density functions
Parametric bootstrap method for fitted models inheriting class.
Fit the generalized distance sampling model of Chandler et al. (2011).
Methods for Function coef in Package `unmarked'
Model selection results from an unmarkedFitList
Convert .CSV File to an unmarkedFrame
Methods for bracket extraction [ in Package `unmarked'
Distance-sampling data for the Island Scrub Jay (Aphelocoma
insularis )
Methods for Function getFP in Package `unmarked'
Convert between wide and long data formats.
Methods for Function vcov in Package `unmarked'
Class "unmarkedRanef"
Methods for Function getP in Package `unmarked'
Simulated point-transect data
Organize data for the distance sampling model of Royle et al. (2004)
fit by distsamp
Convert sight distance and sight angle to perpendicular distance.
Fit the hierarchical distance sampling model of Royle et al. (2004)
Generalized binomial N-mixture model for repeated count data
Convert Poisson mean (lambda) to probability of occurrence (psi).
Methods for Function predict in Package `unmarked'
MHB European Jay data set
Organize data for the single season occupancy models fit by occu and
occuRN
Methods for Function fitted in Package `unmarked'
Removal data for the Ovenbird
Simulated line transect data
Compute multinomial cell probabilities
Methods for Function linearComb in Package `unmarked'
Class "unmarkedFit"
Create unmarkedMultFrame from Long Format Data Frame
Create an object of class unmarkedFramePCO that contains data used by pcountOpen.
Fit occupancy models when false positive detections occur (e.g., Royle and Link [2006]
and Miller et al. [2011])
Fit the MacKenzie et al. (2002) Occupancy Model with the penalized likelihood methods of Hutchinson et al. (2015)
Nonparametric bootstrapping in unmarked
Class "unmarkedFrame"
unmarkedEstimateList-class
Class "unmarkedEstimateList"
Organize data for the N-mixture model fit by pcount
Methods for Function getB in Package `unmarked'
Generalized multinomial N-mixture model
Green frog count index data
Organize data for the single season occupancy models fit by occuFP