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Brent Pedersen - Bioinformatics
https://www.github.com/brentp
Author or maintainer of the following packages:
aclust
Aclust ====== Streaming agglomerative clustering with custom distance and correlation *Agglomerati...
anaconda-build
UNKNOWN
bcbio-nextgen
.. image:: artwork/github.png :alt: bcbio banner :align: center Validated, scalable, communit...
bcolz
bcolz provides columnar and compressed data containers. Column storage allows for efficiently query...
binstar
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binstar-build
UNKNOWN
bsub
bsub ==== python wrapper to submit jobs to bsub (and later qsub) Authors ------ @brentp, @brwnj ...
carray
carray is a chunked container for numerical data. Chunking allows for efficient enlarging/shrinking...
cigar
Cigar ===== cigar is a simple library for dealing with cigar strings. the most useful feature now i...
CNVkit
conda
.. NOTE: This file serves both as the README on GitHub and the index.html for conda.pydata.org. I...
conda-build
=========== conda-build =========== .. image:: https://travis-ci.org/conda/conda-build.svg?branch=m...
cruzdb
A rendered version of the docs is available at: http://pythonhosted.org/cruzdb/ A paper describing ...
Cython
The Cython language makes writing C extensions for the Python language as easy as Python itself. Cy...
cyvcf
CyVCF ====== A Cython port of the PyVCF library maintained by @jamescasbon. The goal of this proje...
cyvcf2
cyvcf2 ====== Fast python **(2 and 3)** parsing of VCF and BCF including region-queries. [