Jr

Jr

5 packages on CRAN

1 packages on Bioconductor

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MNL and overdispersed multinomial regression using robust (LQD and tanh) estimation

PHYLOGR

cran
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Manipulation and analysis of phylogenetically simulated data sets and phylogenetically based analyses using GLS.

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This package implements a Gamma convolution model for background correction.

rgenoud

cran
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A genetic algorithm plus derivative optimizer.

RSocrata

cran
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Provides easier interaction with 'Socrata' open data portals <http://dev.socrata.com>. Users can provide a 'Socrata' data set resource URL, or a 'Socrata' Open Data API (SoDA) web query, or a 'Socrata' "human-friendly" URL, returns an R data frame. Converts dates to 'POSIX' format and manages throttling by 'Socrata'. Users can upload data to 'Socrata' portals directly from R.

methylumi

bioconductor
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This package provides classes for holding and manipulating Illumina methylation data. Based on eSet, it can contain MIAME information, sample information, feature information, and multiple matrices of data. An "intelligent" import function, methylumiR can read the Illumina text files and create a MethyLumiSet. methylumIDAT can directly read raw IDAT files from HumanMethylation27 and HumanMethylation450 microarrays. Normalization, background correction, and quality control features for GoldenGate, Infinium, and Infinium HD arrays are also included.