Using R enviroments for annotation.

Functions that are needed by many other packages or which
replace R functions.

Software and data to support the case studies.

A collection of software tools for calculating distance
measures.

Memory efficient string containers, string matching
algorithms, and other utilities, for fast manipulation of large
biological sequences or sets of sequences.

A collection of tools for performing category analysis.

A collection of software tools for dealing with
co-citation data.

A set of functions to create and interact with dynamic
documents and vignettes.

Provides quality control and quality assessment tools for flow
cytometry data.

Provides utilities for flow cytometry data.

Provides visualization tools for flow cytometry data.

Some basic functions for filtering genes

A collection of meta-analysis tools for analysing high
throughput experimental data

Functions for plotting genomic data

A set of tools for interacting with GO and microarray
data. A variety of basic manipulation tools for graphs,
hypothesis testing and other simple calculations.

A package that implements some simple graph handling
capabilities.

Many functions for computing the NPMLE for censored and
truncated data.

A very simple implementation of a class for
longitudinal data.

Different data resources for microRNAs and some functions
for manipulating them.

A fairly extensive and comprehensive interface to the
graph algorithms contained in the BOOST library.