V. Carey

V. Carey

5 packages on Bioconductor

affyContam

bioconductor
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structured corruption of cel file data to demonstrate QA effectiveness

arrayMvout

bioconductor
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This package supports the application of diverse quality metrics to AffyBatch instances, summarizing these metrics via PCA, and then performing parametric outlier detection on the PCs to identify aberrant arrays with a fixed Type I error rate

Biobase

bioconductor
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Functions that are needed by many other packages or which replace R functions.

genefilter

bioconductor
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Some basic functions for filtering genes

smoothMiner

bioconductor
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use smooth regression to investigate families of trajectories