phyclust (version 0.1-22)

.identifier: Identifiers for Evolution Models

Description

Identifiers for evolution models identify the \(Q_k\) matrix and evolution time \(t_k\) for subpopulations. The first element is the default value. This is a read-only object and the elemental order is followed in C.

Usage

.identifier

Format

A character vector contains implemented identifiers in C.

Details

Four major identifiers are implemented in C, EE, EV, VE, and VV. The first letter indicates the structure for \(Q_k\) matrix, and the second letter indicates the evolution time \(t_k\) for subpopulations. E and V indicate equal and varied for all subpopulations.

References

Phylogenetic Clustering Website: http://snoweye.github.io/phyclust/

See Also

.show.option, .EMC, .EMControl, phyclust.

Examples

# NOT RUN {
library(phyclust, quiet = TRUE)

.identifier
# }