AromaTransform: The AromaTransform class
Description
Package: aroma.core
Class AromaTransform
Object
~~|
~~+--AromaTransform
Directly known subclasses:
public abstract static class AromaTransform
extends Object
This abstract class represents a transform (algorithm/operator) that
transforms data. A transform has an input data set, which is
transformed into an output data set.Usage
AromaTransform(dataSet=NULL, tags="*", ..., .reqSetClass="AromaMicroarrayDataSet")
Arguments
tags
A character vector of tags to be appended to the tags of
the input data set. .reqSetClass
Internal argument.
Fields and Methods
Methods:
rll{
getFullName Gets the full name of the output data set.
getInputDataSet Gets the input data set.
getName Gets the name of the output data set.
getOutputDataSet Gets the transformed data set.
getPath Gets the path of the output data set.
getTags Gets the tags of the output data set.
isDone Checks if the data set is processed or not.
process Processes the data set.
setTags -
}
Methods inherited from Object:
asThis, $, $<-, [[, [[<-, as.character, attach, attachLocally, clearCache, clone, detach, equals, extend, finalize, gc, getEnvironment, getFields, getInstantiationTime, getStaticInstance, hasField, hashCode, ll, load, objectSize, print, saveDetails
Subclasses must implement the process() method.