Package: aroma.core Class AromaTransform
Object
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ParametersInterface
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AromaTransform
Directly known subclasses:
public abstract static class AromaTransform extends ParametersInterface
This abstract class represents a transform (algorithm/operator) that transforms data. A transform has an input data set, which is transformed into an output data set.
AromaTransform(dataSet=NULL, tags="*", ..., .reqSetClass="AromaMicroarrayDataSet")
The input data set as an AromaMicroarrayDataSet
.
Not used.
Internal argument.
Methods:
getFullName |
Gets the full name of the output data set. | |
getInputDataSet |
Gets the input data set. | |
getName |
Gets the name of the output data set. | |
getOutputDataSet |
Gets the transformed data set. | |
getPath |
Gets the path of the output directory. | |
getRootPath |
Gets the root path of the output directory. | |
getTags |
Gets the tags of the output data set. | |
isDone |
Checks if the data set is processed or not. | |
process |
Processes the data set. | |
setTags |
- |
Methods inherited from ParametersInterface: getParameterSets, getParameters, getParametersAsString
Methods inherited from Object: $, $<-, [[, [[<-, as.character, attach, attachLocally, clearCache, clearLookupCache, clone, detach, equals, extend, finalize, getEnvironment, getFieldModifier, getFieldModifiers, getFields, getInstantiationTime, getStaticInstance, hasField, hashCode, ll, load, names, objectSize, print, save, asThis
Subclasses must implement the process()
method.