CN.features

<p>Classification Table of Copy Number Features Devised by Wang et al. for Method 'W'</p>

Genomic alterations including single nucleotide
substitution, copy number alteration, etc. are the major force for
cancer initialization and development. Due to the specificity of
molecular lesions caused by genomic alterations, we can generate
characteristic alteration spectra, called 'signature' (Wang, Shixiang,
et al.  (2020) <DOI:10.1101/2020.04.27.20082404> & Alexandrov, Ludmil
B., et al. (2020) <DOI:10.1038/s41586-020-1943-3> & Macintyre, Geoff,
et al. (2018) <DOI:10.1038/s41588-018-0179-8>).  This package helps
users to extract, analyze and visualize signatures from genomic
alteration records, thus providing new insight into cancer study.

Shixiang Wang

sigminer

Extract, Analyze and Visualize Mutational Signatures for Genomic
Variations

Ziyu Tao

Huimin Li

Tao Wu

Xue-Song Liu

Geoffrey Macintyre

Anand Mayakonda

CN.features function

<p>A <code>data.table</code> with "sigminer.features" class name</p>

Format

Classification Table of Copy Number Features Devised by Wang et al. for Method 'W' — CN.features

Classification Table of Copy Number Features Devised by Wang et al. for Method 'W'

CN.features: Classification Table of Copy Number Features Devised by Wang et al. for Method 'W'

Description

Arguments

Format

Examples