ChipEffectGroupMerge: The ChipEffectGroupMerge class

Description

Package: aroma.affymetrix Class ChipEffectGroupMerge

Object ~~| ~~+--ParametersInterface ~~~~~~~| ~~~~~~~+--AromaTransform ~~~~~~~~~~~~| ~~~~~~~~~~~~+--Transform ~~~~~~~~~~~~~~~~~| ~~~~~~~~~~~~~~~~~+--ChipEffectTransform ~~~~~~~~~~~~~~~~~~~~~~| ~~~~~~~~~~~~~~~~~~~~~~+--ChipEffectGroupMerge

Directly known subclasses: SnpChipEffectGroupMerge

public static class ChipEffectGroupMerge extends ChipEffectTransform

This class represents a method that merges chip effects across groups unit by unit.

Usage

ChipEffectGroupMerge(dataSet=NULL, fcn=NULL, ...)

Arguments

dataSet

A ChipEffectSet.

fcn

A function used to "merge" groups.

...

Additional arguments passed to the constructor of ChipEffectTransform.

Fields and Methods

Methods:

	`getCdf`
-
`getMergeFunction`	-
	`process`
-
`setMergeFunction`	-

Methods inherited from ChipEffectTransform: getRootPath Methods inherited from Transform: getOutputDataSet, getOutputFiles Methods inherited from AromaTransform: as.character, findFilesTodo, getAsteriskTags, getExpectedOutputFiles, getExpectedOutputFullnames, getFullName, getInputDataSet, getName, getOutputDataSet, getOutputDataSet0, getOutputFiles, getPath, getRootPath, getTags, isDone, process, setTags Methods inherited from ParametersInterface: getParameterSets, getParameters, getParametersAsString Methods inherited from Object: $, $<-, [[, [[<-, as.character, attach, attachLocally, clearCache, clearLookupCache, clone, detach, equals, extend, finalize, getEnvironment, getFieldModifier, getFieldModifiers, getFields, getInstantiationTime, getStaticInstance, hasField, hashCode, ll, load, objectSize, print, save, asThis