Object
~~|
~~+--FullNameInterface
~~~~~~~|
~~~~~~~+--GenericDataFileSet
~~~~~~~~~~~~|
~~~~~~~~~~~~+--CnagCfhSet
Directly known subclasses:
public static class CnagCfhSet
extends GenericDataFileSet
An CnagCfhSet object represents a set of CNAG CFH files
with identical chip types.CnagCfhSet(files=NULL, ...)list of CnagCfhFile:s.as -
as.CnagCfhSet Coerce an object to an CnagCfhSet object.
byName -
getAverage -
getAverageAsinh -
getAverageFile Calculates the mean and the standard deviation of the cell signal (intensity, standard deviation etc.) across the CFH set.
getAverageLog -
getCdf Gets the CDF structure for this CFH set.
getData -
getTimestamps -
readUnits -
setCdf Sets the CDF structure for this CFH set.
}Methods inherited from GenericDataFileSet: [, append, appendFiles, appendFullNamesTranslator, appendFullNamesTranslatorByNULL, appendFullNamesTranslatorByTabularTextFile, appendFullNamesTranslatorByTabularTextFileSet, appendFullNamesTranslatorBydata.frame, appendFullNamesTranslatorByfunction, appendFullNamesTranslatorBylist, as.character, as.list, byName, byPath, c, clearCache, clearFullNamesTranslator, clone, copyTo, equals, extract, findByName, getChecksum, getChecksumObjects, getDefaultFullName, getFile, getFileClass, getFileSize, getFiles, getFullNames, getNames, getOneFile, getPath, getPathnames, getSubdirs, hasFile, indexOf, nbrOfFiles, resetFullNames, seq, setFullNamesTranslator, sortBy, update2, updateFullName, updateFullNames, validate, getFullNameTranslatorSet, getParentName
Methods inherited from FullNameInterface: appendFullNameTranslator, appendFullNameTranslatorByNULL, appendFullNameTranslatorByTabularTextFile, appendFullNameTranslatorByTabularTextFileSet, appendFullNameTranslatorBycharacter, appendFullNameTranslatorBydata.frame, appendFullNameTranslatorByfunction, appendFullNameTranslatorBylist, clearFullNameTranslator, clearListOfFullNameTranslators, getDefaultFullName, getFullName, getFullNameTranslator, getListOfFullNameTranslators, getName, getTags, hasTag, hasTags, resetFullName, setFullName, setFullNameTranslator, setListOfFullNameTranslators, setName, setTags, updateFullName
Methods inherited from Object: $, $<-, [[, [[<-, as.character, attach, attachLocally, clearCache, clearLookupCache, clone, detach, equals, extend, finalize, gc, getEnvironment, getFieldModifier, getFieldModifiers, getFields, getInstantiationTime, getStaticInstance, hasField, hashCode, ll, load, objectSize, print, save, asThis
CnagCfhFile.