SeqGSEA (version 1.12.0)

DSresultExonTable: Form a table for DS analysis results at the Exon level

Description

Form a table for differential splicing analysis results at the Exon level.

Usage

DSresultExonTable(RCS)

Arguments

RCS

A ReadCountSet object with DSpermutePval done.

Value

A matrix containing exon DS analysis results, including testability, NBstats, p-values and adjusted p-values.

Details

A data frame containing each exon's NB-statistics, p-values and adjusted p-values for differential splicing analysis.

See Also

DSresultGeneTable, DSpermutePval

Examples

data(RCS_example, package="SeqGSEA")
permuteMat <- genpermuteMat(RCS_example, times=10)
RCS_example <- exonTestability(RCS_example)
RCS_example <- estiExonNBstat(RCS_example)
RCS_example <- estiGeneNBstat(RCS_example)
RCS_example <- DSpermutePval(RCS_example, permuteMat)
head(DSresultExonTable(RCS_example))