
This function returns the modal latent states.
InferenceXi(listXi, niter, burnin)
Last three objects of the output of the main function
Number of Monte Carlo Markov Chain iterations
Burn-in
Matrix of modal latent states, i.e. estimated Copy Number Variants. A four class classification is considered:
Loss
Neutral
Gain
Amplification
Must use the same burn-in as in the main function.
Cassese A, Guindani M, Tadesse M, Falciani F, Vannucci M. A hierarchical Bayesian model for inference of copy number variants and their association to gene expression. Annals of Applied Statistics, 8(1), 148-175. Cassese A, Guindani M, Vannucci M. A Bayesian integrative model for genetical genomics with spatially informed variable selection. Cancer Informatics.
See Also as Inference
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##See Inference
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