MOJOV.summary:
Exporting summary information for genotype.
Description
Exporting summary information for genetype data. Including total information, such as how many genes, how many variants, how many rare variants. And some information for each gene.
Usage
MOJOV.summary(x = NULL, ROI = "scan", bin = c(0, 0.01, 0.05, 0.1, 0.2, 0.3, 0.4, 0.5), MAF = 0.05, ...)
Arguments
x
A "MOJOV" class.
ROI
It can be "scan" or a gene symbol. If it is "scan", it will scan the whole genome for every gene. Or it only run for the specified gene.
bin
A bin for frequency statistic.The defalut value is c(0, 0.01, 0.05,0.1, 0.2, 0.3, 0.4, 0.5).
MAF
Specify the minor allele frequency, and the default value is 0.05.