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aroma.affymetrix (version 3.0.0)

Model: The Model class

Description

Package: aroma.affymetrix Class Model

Object ~~| ~~+--ParametersInterface ~~~~~~~| ~~~~~~~+--Model

Directly known subclasses: AffineCnPlm, AffinePlm, AffineSnpPlm, AlleleSummation, AvgCnPlm, AvgPlm, AvgSnpPlm, CrlmmModel, ExonRmaPlm, FirmaModel, HetLogAddCnPlm, HetLogAddPlm, HetLogAddSnpPlm, MbeiCnPlm, MbeiPlm, MbeiSnpPlm, MultiArrayUnitModel, ProbeLevelModel, RmaCnPlm, RmaPlm, RmaSnpPlm, SingleArrayUnitModel, UnitModel

public abstract static class Model extends ParametersInterface

This class is abstract and represents a generic model that applies to a data set.

Usage

Model(dataSet=NULL, tags="*", ..., .onUnknownArgs=c("error", "warning", "ignore"))

Arguments

dataSet
The data set to which this model should be fitted.
tags
A character vector of tags to be appended to the tags of the input data set.
...
Not used.
.onUnknownArgs
A character string specifying what should occur if there are unknown arguments in ....

Fields and Methods

Methods:
fit
-
getAsteriskTags -
getDataSet
-
getFullName -
getName
-
getPath -
getTags
-
setTags -
Methods inherited from ParametersInterface: getParameterSets, getParameters, getParametersAsString Methods inherited from Object: $, $<-, [[, [[<-, as.character, attach, attachLocally, clearCache, clearLookupCache, clone, detach, equals, extend, finalize, getEnvironment, getFieldModifier, getFieldModifiers, getFields, getInstantiationTime, getStaticInstance, hasField, hashCode, ll, load, objectSize, print, save, asThis