boclust (version 0.1.1)

OverlapClust: Overlap Clustering

Description

Do overlap clustering with Bossa similarity in different levels of p.

Usage

OverlapClust(data.simi, p = c(0.9, 0.75, 0.5), lin = 0.25,
  pro.show = FALSE)

Arguments

data.simi

The similarity matrix of Bossa scores obtained by BossaSimi

p

A set of quantiles(90 similarity matrix to form clusters at different levels of within-cluster similarity.

lin

A tuning parameter to control the size of each overlap cluster before merging, smaller lin leads to larger cluster size.

pro.show

A logical indicator whether show the details of the process.

Value

A list including two data.frame: overlap sub-clusters and cluster center for each.

Examples

# NOT RUN {
{
data(bo.simu.data)

## calculate the similarity matrix
bossa.simi <- BossaSimi(bo.simu.data)$bossa.simi

overlap.clust <- OverlapClust(bossa.simi)
}
# }