Usage
SSplotSpawnrecruit(replist, subplot=1:2, add = FALSE, plot = TRUE,
print = FALSE, xlim = NULL, ylim = NULL, xlab = "Spawning biomass (mt)",
ylab = "Recruitment (1,000s)", plotdir = "default",
pwidth = 7, pheight = 7, punits = "in", res = 300, ptsize = 12,
cex.main = 1, verbose = TRUE, line1 = "blue", line2 = "green3",
line3 = "black", minyr = "default", textmindev = 0.5, ptcol = "red",
virg = TRUE, init = FALSE)
Arguments
replist
list created by SS_output
subplot
vector of which subplots to show.
1=plot without labels,
2=plot with year labels.
plot
plot to active plot device?
xlim
optional control of x range
ylim
optional control of y range
plotdir
directory where PNG files will be written. by default it will
be the directory where the model was run.
pwidth
width of plot written to PNG file
pheight
height of plot written to PNG file
res
resolution for PNG file
ptsize
ptsize for PNG file
cex.main
character expansion for plot titles
verbose
report progress to R GUI?
minyr
minimum year of recruitment deviation to show in plot
textmindev
minimum recruitment deviation for label to be added so only extreme
devs are labeled (labels are added to first and last years as well).
Default=0.7.
virg
add point for equilibrium conditions (x=B0,y=R0)
init
add point for initial conditions (x=B1,y=R1)