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bayesplot (version 1.7.1)

Plotting for Bayesian Models

Description

Plotting functions for posterior analysis, MCMC diagnostics, prior and posterior predictive checks, and other visualizations to support the applied Bayesian workflow advocated in Gabry, Simpson, Vehtari, Betancourt, and Gelman (2019) . The package is designed not only to provide convenient functionality for users, but also a common set of functions that can be easily used by developers working on a variety of R packages for Bayesian modeling, particularly (but not exclusively) packages interfacing with 'Stan'.

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Version

Install

install.packages('bayesplot')

Monthly Downloads

33,958

Version

1.7.1

License

GPL (>= 3)

Maintainer

Jonah Gabry

Last Published

December 1st, 2019

Functions in bayesplot (1.7.1)

MCMC-overview

Plots for Markov chain Monte Carlo simulations
MCMC-intervals

Plot interval estimates from MCMC draws
MCMC-diagnostics

General MCMC diagnostics
MCMC-nuts

Diagnostic plots for the No-U-Turn-Sampler (NUTS)
MCMC-distributions

Histograms and kernel density plots of MCMC draws
MCMC-combos

Combination plots
MCMC-parcoord

Parallel coordinates plot of MCMC draws
MCMC-recover

Compare MCMC estimates to "true" parameter values
MCMC-scatterplots

Scatterplots of MCMC draws
MCMC-traces

Trace plots of MCMC draws
available_ppc

Get or view the names of available plotting functions
PPC-test-statistics

PPC test statistics
PPC-scatterplots

PPC scatterplots
PPC-errors

PPC errors
PPC-intervals

PPC intervals
PPC-overview

Graphical posterior predictive checking
PPC-loo

LOO predictive checks
PPC-distributions

PPC distributions
PPC-discrete

PPCs for discrete outcomes
theme_default

Default bayesplot plotting theme
bayesplot-package

bayesplot: Plotting for Bayesian Models
example-data

Example draws to use in demonstrations and tests
bayesplot-colors

Set, get, or view bayesplot color schemes
bayesplot_theme_get

Get, set, and modify the active bayesplot theme
bayesplot-extractors

Extract quantities needed for plotting from model objects
tidy-params

Tidy parameter selection
bayesplot_grid

Arrange plots in a grid
reexports

Objects exported from other packages
pp_check

Posterior (or prior) predictive checks (S3 generic and default method)
bayesplot-helpers

Convenience functions for adding or changing plot details