UnitTypesFile

Arguments passed to <code><a rd-options="" href="/link/UnitAnnotationDataFile?package=aroma.core&version=3.1.1" data-mini-rdoc="aroma.core::UnitAnnotationDataFile">UnitAnnotationDataFile</a></code>.

Package: aroma.core 
Class UnitTypesFile<code><a rd-options="R.oo" href="/link/Interface?package=aroma.core&version=3.1.1&to=R.oo" data-mini-rdoc="R.oo::Interface">Interface</a></code>
<code>~~|</code>
<code>~~+--</code><code><a rd-options="aroma.core" href="/link/UnitAnnotationDataFile?package=aroma.core&version=3.1.1&to=aroma.core" data-mini-rdoc="aroma.core::UnitAnnotationDataFile">UnitAnnotationDataFile</a></code>
<code>~~~~~~~|</code>
<code>~~~~~~~+--</code><code>UnitTypesFile</code>Directly known subclasses:
<a rd-options="aroma.core" href="/link/AromaUnitTypesFile?package=aroma.core&version=3.1.1&to=aroma.core" data-mini-rdoc="aroma.core::AromaUnitTypesFile">AromaUnitTypesFile</a>
public abstract static class UnitTypesFile
extends <a rd-options="aroma.core" href="/link/UnitAnnotationDataFile?package=aroma.core&version=3.1.1&to=aroma.core" data-mini-rdoc="aroma.core::UnitAnnotationDataFile">UnitAnnotationDataFile</a>A UnitTypesFile provides methods for querying the unit types of
 a given chip type, e.g. genotyping or copy-number unit, exon unit etc.

classes

Core methods and classes used by higher-level aroma.* packages
part of the Aroma Project, e.g. aroma.affymetrix and aroma.cn.

Henrik Bengtsson

aroma.core

Core Methods and Classes Used by 'aroma.*' Packages Part of the
Aroma Framework

Mark Robinson

Ken Simpson

UnitTypesFile function

Methods:<table><tr><td>
 </td>
<td> <code>getUnitTypes</code> </td>
<td> -</td>
</tr><tr><td>
 </td>
<td> <code>nbrOfUnits</code> </td>
<td> -</td>
</tr></table>Methods inherited from UnitAnnotationDataFile:
byChipType, getAromaUflFile, getAromaUgpFile, getChipType, getDefaultExtension, getPlatform, nbrOfUnits
Methods inherited from Interface:
extend, print, uses

Methods

unknown=0,
 expression=1,
 genotyping=2,
 resequencing=3,
 tag=4,
 copynumber=5,
 genotypingcontrol=6,
 expressioncontrol=7

The aroma unit-type map

Arguments passed to <code><a rd-options='' href='UnitAnnotationDataFile'>UnitAnnotationDataFile</a></code>.

UnitTypesFile: The UnitTypesFile interface class

Description

Usage

Arguments

Methods

The aroma unit-type map

	`getUnitTypes`	-
	`nbrOfUnits`	-