aafGO-class: Class aafGO, a class for gene ontology ids
Description
An abstraction for gene ontology ids from Bioconductor data
packages. This class is actually extends aafList and holds
aafGOItem objects which have the actual annotation data.
Objects from the Class
Objects are generally created by the aafGO constructor.
Objects can also be created manually by calls of the form
new("aafGO", list(goitems)).Slots
.Data:- Object of class
list
Extends
Class aafList, from data part.Methods
- getText
-
(aafGO): Returns a comma delimeted list of the individual
aafGOItem objects.
- getURL
-
(aafGO): Returns a single URL to an AmiGO page which displays
all the gene ontology identifiers in an hierarchical listing.
- getHTML
-
(aafGO): Returns an HTML representation of each of the
individual
aafGOItem objects, concatenated together.
- getTD
-
(aafGO): Returns an HTML table cell representation with the
class set to "aafGO".
- getCSS
-
(aafGOItem): Returns a line of CSS that indents GOItem paragraphs.