FBN (version 1.5.2)

FISH Based Normalization and Copy Number Inference of SNP Microarray Data

Description

Normalizes the data from a file containing the raw values of the SNP probes of microarray data by using the FISH probes and their corresponding copy number.

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Version

Install

install.packages('FBN')

Monthly Downloads

228

Version

1.5.2

License

GPL (>= 2)

Maintainer

Luca Agnelli

Last Published

June 17th, 2023

Functions in FBN (1.5.2)

FBN-package

FISH Based Normalization and Copy Number Inference of SNP Microarray Data

FBN.histogramMaxima

Local maxima of the histogram of SNP microarray data

medianFilter

1D Median Filter

FBN.kmeans

K-Means clustering of SNP microarray data

FBNormalization

FISH Based Normalization and Copy Number Inference of SNP Microarray Data

FBN.valueCenter

The SNP normalization function

hmcls

Sample data for FBN package

meanFilter

1D Mean Filter

FISHprobes

Sample data for FBN package