Tests of randomization on the correlation between two distance matrices (in R).
Arrivals at an intensive care unit
The ade4 package
Deprecated functions in ade4
African Estuary Fishes
Spatial pattern analysis in plant communities
Add graphics to an existing plot
Internal ade4 functions
Utility function to test if the package adegraphics is loaded
Codon usage
Taxonomy
Small Ecological Dataset
Between-Class Analysis
Genetic variability of Cacadors
Import data files from Phylogenetic Independance Package
Analysis of molecular variance
Monte-Carlo Test on the sum of eigenvalues of a co-inertia analysis (in C++ with Rcpp).
Genomes of 43 Bacteria
Table of Factors
Road Distances
Allelic frequencies in ten honeybees populations at eight microsatellites loci
Phylogeny and quantative trait of carnivora
Wine Tasting
Cubic Ecological Data
Ecological and Biological Traits
Bird species distribution
Coinertia Analysis
Buech basin
Genetics-Ecology-Environment Triple
Table of Fuzzy Biological Traits
Double Weighted Centring
Enzymatic polymorphism in Leuciscus cephalus
Fruit Production
Rao's diversity coefficient also called quadratic entropy
Frequenting movie theaters in France in 2003
Computation of Distance Matrices of Percentage Data
Apportionment of Quadratic Entropy
Fauna Table for Constrained Ordinations
Computation of Distance Matrices on Quantitative Variables
Maximal value of Rao's diversity coefficient also called
quadratic entropy
Pair of Tables
Representation of many quantitative variables in front of a phylogenetic tree
Veterinary epidemiological study to assess the risk factors for losses in broiler chickens
Ecological Tables Triplet
Representation of n values on a circle
Dune Meadow Data
Electrocardiogram data
Microsatellites of Galapagos tortoises populations
Granulometric Curves
Computation of Distance Matrices for Binary Data
Complete regular grid analysis
Genetic Variation In Human Populations
Computation of the Distance Matrix from a Statistical Triplet
Phylogeny and quantitative traits of carnivora
a way to obtain Euclidean distance matrices
Taxonomy, phylogenies and quantitative traits of carnivora and herbivora
Monte-Carlo Test on the sum of eigenvalues of a within-class co-inertia analysis (in C++ with Rcpp).
Phylogenies and quantitative traits from Abouheif
Distribution of Alpine plants in Aravo (Valloire, France)
Generic Function for Multiple Graphs in a K-tables Analysis
Correspondence Analysis
Decentred Correspondence Analysis
Fauna Table with double (row and column) partitioning
Between-class coinertia analysis
Monte-Carlo test on a Costatis analysis (in C).
Ordination of Tables mixing quantitative variables and factors
Dagnelie multinormality test
Non symmetric correspondence analysis
Linear Discriminant Analysis (descriptive statistic)
Between-Class RLQ analysis
Multiple Graphs for Separated Analyses in a K-tables
Moran's I and Geary'c randomization tests for spatial and phylogenetic autocorrelation
Functions to compute the fourth-corner statistic
Morphometric data set
Contingency Table
Faunistic K-tables
Multiple Graphs of a STATIS Analysis
Pair of Variables
Between- and within-class double principal coordinate analysis
K-tables Multi-Regions
the class of objects 'kdist' (K distance matrices)
Transformation to make Euclidean a distance matrix
Transformation of K distance matrices (object 'kdist') into K Euclidean representations (object 'ktab')
Leave-one-out cross-validation for a dudi
Ponds in a nature reserve
Landmarks
Creation of a K-tables from a list of duality diagrams
Discriminant Correspondence Analysis
STATIS and Co-Inertia : Analysis of a series of paired ecological tables
Correspondence Analysis Table
Wine Tasting
Assemblages of Macroinvertebrates in the Loire River (France)
Process to go from a Within Analysis to a K-tables
Multiple Double Principal Coordinate Analysis
Genetic/Environment and types of variables
Mantel test (correlation between two distance matrices (in R).)
Enzymatic polymorphism in Mus musculus
Charolais-Zebus
Principal Component Analysis
Phylogeny and quantitative traits of flowers
Phylogeny and quantitative traits of teleos fishes
Genetic Relationships between cattle breeds with microsatellites
Multiblock principal component analysis with instrumental variables
Minimal Spanning Tree
Ecological Data : sites-variables, sites-species, where and when
Multivariate spatial analysis
Multivariate spatial autocorrelation test (in C)
Display and summarize multiblock objects
Principal Coordinates Analysis
Oribatid mite
Originality of a species
Qualitative Weighted Variables
Corvus morphology
STATIS and Co-Inertia : Analysis of a series of paired ecological tables
Principal component analysis with respect to instrumental variables
Principal Component Analysis with respect to orthogonal instrumental variables
Fission pattern and heritable morphological traits
Reconstitution of Data from a Duality Diagram
Exam marks for some students
Phylogenetic trees in Newick format
Rao's dissimilarity coefficient
Phylogenetic and quantitative traits of amazonian palm trees
K-tables Correspondence Analysis with the same rows and the same columns
Is a Distance Matrix Euclidean?
Taxonomy and quantitative traits of carnivora
Create phylogeny
Functions to combine and adjust the outputs 3-table methods
Tests of randomization between distances applied to 'kdist' objetcs
Duality Diagram
Genetic structure of two nitrogen fixing bacteria influenced
by geographical isolation and host specialization
Multiple Correspondence Analysis
Contingency Table with a partition in Molecular Biology
Plant traits response to grazing
Plot of factorial maps with representation of point classes
Fuzzy Correspondence Analysis and Fuzzy Principal Components Analysis
Mixed-variables coefficient of distance
Phylogeny
Plot phylogenies
Ordination of Tables mixing quantitative variables and factors
Plot of the factorial maps of a correlation circle
Representation of a value in a graph
Computation of the Distance Matrix associated to a Neighbouring Graph
Seed dispersal
Between-Class Analysis
Transformation of a distance matrice to a Euclidean one
Multiple Graphs for the Foucart's Correspondence Analysis
Within-Class Analysis
Bootstrap simulations
Two-fold cross-validation
Pair of Ecological Tables
Multiple Graphs for a Multiple Co-inertia Analysis
Permutation test for double principal coordinate analysis (DPCoA)
K-tables of wine-tasting
Indirect Ordination
Representation by mean- standard deviation of a set of weight distributions on a numeric score
Triangular Data
Decomposition of inertia (i.e. contributions) in multivariate methods
Geary's Irish Data
Creation of K-tables from a data frame
Class of the Permutation Tests (in C).
Double principal coordinate analysis
Ordination Table
Ecomorphological Convergence
Creating a K-tables from a list of data frames.
Electoral Data
Plot of a frequency distribution
Display of a scatterplot and its two marginal histograms
human mitochondrial DNA restriction data
Monte-Carlo Test on the percentage of explained (i.e.
constrained) inertia
the class of objects 'ktab' (K-tables)
Graphs to study one factor in a Multiple Correspondence Analysis
Phyto-Ecological Survey
Transformation of a Distance Matrix for becoming Euclidean
Mantel test (correlation between two distance matrices (in C).)
Ecological Data : sites-variables, sites-species, where and when
Graphical representation of the outputs of a multivariate analysis
Avifauna and Vegetation
Point sampling of fish community
Multiple Graphs for a Multiple Factorial Analysis
Phylogeny and quantitative traits of lizards
Multiple Factorial Analysis
Plot of the factorial maps in a Multiple Correspondence Analysis
Relationships between one score and qualitative variables
Multiblock partial least squares
Class of the Permutation Tests (in R).
Distance Matrices
Multiple CO-inertia Analysis
Global State of the World in 1984
Method to Analyse a pair of tables : Environmental and Faunistic Data
Graphs to Analyse a factor in a Mixed Analysis
Athletes' Morphology
Phylogeny and trait of bacteria
Morphometric Evolution
Scatter Plot
Olympic Decathlon
Graphs to Analyse a factor in PCA
Plot of the factorial maps for a correspondence analysis
Monte-Carlo test on a Statico analysis (in C).
Multiple Graphs for a Partial Triadic Analysis
Leave-one-out cross-validation for a bca
Non-linear Iterative Partial Least Squares (NIPALS) algorithm
Leave-one-out cross-validation for a discrimin
analysis
Monte-Carlo Test on the sum of the singular values of a procustean rotation (in R).
Partial Triadic Analysis of a K-tables
Representation of an object in a graph by a picture
Plot of the Factorial Maps
STATIS, a method for analysing K-tables
Faunistic Communities and Sampling Experiment
Multi Level Decomposition of unidimensional data
Simplified Analysis in Principal Coordinates
Homogeneous Table
Distribution of of tropical trees along the Panama canal
Triangular Representation and Groups of points
Results of the French presidential elections of 2002
Bootstraped simulations for multiblock methods
Within-Class Analysis
Phylogeny and quantitative traits of birds
Projections of Supplementary Rows for a Partial Triadic Analysis of K-tables
Phylogeny and quantitative traits of flowers
Within-class coinertia analysis
Plot of Paired Coordinates
Scatterplot of two sets of coordinates and a partionning into classes
Permutation tests on an analysis of molecular variance (in C).
Within-Class RLQ analysis
Graph to Analyse the Relation between a Score and Quantitative Variables
STATIS and Co-Inertia : Analysis of a series of paired ecological tables
Monte-Carlo Test on the between-groups inertia percentage (in C).
Class of the Permutation Tests (in C).
Monte-Carlo Test on the between-groups inertia percentage (in R).
Multivariate spatial autocorrelation test
Graph of frequency profiles (useful for instance in genetic)
Physico-Chemistry Data
Monte-Carlo Test on a Discriminant Analysis (in R).
Representation of a quantitative variable in front of a phylogenetic tree
Road distances in New-Zealand
Selection of the number of dimension by two-fold cross-validation for multiblock methods
Plot of the factorial maps for the projection of a vector basis
Neighbourhood Graphs
RLQ analysis
Plot of the factorial maps for a fuzzy correspondence analysis
Plot of the factorial maps with polygons of contour by level of a factor
Graph of a variable using image and contour
Scatter Plot with Kernel Density Estimate
Orthonormal basis for orthonormal transform
A table of Qualitative Variables
Freshwater fish zoogeography in west Africa
Simple Procruste Rotation between two sets of points
Graphical utility functions
Tinto and Odiel estuary geochemistry
Monte-Carlo Test on the sum of the singular values of a procustean rotation (in C).
Morphological Study of the Painted Turtle
Examples of taxonomy
Students and Subjects
Reciprocal scaling after a correspondence analysis
Triangular Plotting
Monte-Carlo test on a Co-inertia analysis (in C).
Monte-Carlo Test on a Discriminant Analysis (in C).
Array of Recapture of Rings
Graphs for One Dimension
Compute or scale data using (weighted) means, variances and
covariances (possibly for the levels of a factor)
Two Questions asked on a Sample of 1000 Respondents
Projections of Supplementary Rows
Representation of the link between a variable and a set of qualitative variables
Trajectory Plot
1D plot of a numeric score with labels
1D plot of a numeric score and a factor with labels
Projection of additional items in a PCO analysis
Average temperatures of 30 French cities
Mountain Avifauna
1D plot of a pair of numeric scores with labels
Function to perform a test of dimensionality
Transect in the Vegetation
Normed within principal component analysis
Vegetation in Trois-Fontaines
Separated Analyses in a K-tables
Plot of the Arrays
Pair of Ecological Data
Projections of Supplementary Columns
Example for Centring in PCA
Plot of Contingency Tables
Graph Display for Distance Matrices
Plot of the arrays by grey levels
Plot arrays in front of a phylogenetic tree
Plant assemblages in woodlands of the conurbation of Angers (France)
The phylogenetic ANOVA
Phylogeny and quantitative traits of ungulates.
Partition of the variation of a response multivariate table by 2 explanatory tables
Elimination of Duplicated Rows in a Array
French Worker Survey (1970)
Internal Correspondence Analysis
Monte-Carlo Test on the sum of eigenvalues of a co-inertia analysis (in R).
Graphical Display of Areas