available.data

Available data can be loaded using <code><a rd-options="spots" href="/link/LoadData?package=spots&version=0.1.0&to=spots" data-mini-rdoc="spots::LoadData">LoadData</a></code> function.

datasets

The spots package is designed for spatial omics (10x Visium, etc.) data analysis. It performs various statistical analyses and tests, including spatial component analysis (SCA), both global and local spatial statistics, such as univariate and bivariate Moran's I, Getis-Ord Gi* statistics, etc. See Integrated protein and transcriptome high-throughput spatial profiling (2022) <doi:10.1101/2022.03.15.484516> for more details.

X. Steve Niu

spots

Spatial Component Analysis

available.data function

A data frame with 2 rows (datasets) and 5 columns (attributes):<dl class="dl-horizontal">
<dt>filename</dt><dd>Dataset</dd>
<dt>md5</dt><dd>MD5 checksum</dd>
<dt>url</dt><dd>URL link</dd>
<dt>date</dt><dd>Date updated</dd>
<dt>size</dt><dd>Data size</dd>
</dl>

Format

Available data can be loaded using <code><a rd-options='spots' href='LoadData'>LoadData</a></code> function.

Available data — available.data

A data frame with 2 rows (datasets) and 5 columns (attributes):<dl class='dl-horizontal'>
<dt>filename</dt><dd>Dataset</dd>
<dt>md5</dt><dd>MD5 checksum</dd>
<dt>url</dt><dd>URL link</dd>
<dt>date</dt><dd>Date updated</dd>
<dt>size</dt><dd>Data size</dd>
</dl>

available.data: Available data

Description

Usage

Arguments

Format