breastCancer:
Breast cancer data for clonal decomposition.
Description
Counts data from multiple samples of a single primary breast cancer obtained by deep, next-generation sequencing.
The file is consist of two matrices Dt and Dc which contain the counts of the alternative alleles, and the total number of counts on each genomic loci for every tumor samples, accordingly.
Usage
data(breastCancer)
Arguments
Format
A list containing 2 matrices.
Details
Each matrix contains counts of reads mapped to 17 genomic loci for 12 tumor samples where
the column A5-2 corresponds to the normal sample.
References
Inferring clonal composition from multiple sections of a breast cancer, Zare et al., Submitted.