r3Cseq (version 1.18.0)

calculateBatchRPM: calculate read per million (RPM) for replicates analysis

Description

Normalize 3C-Seq data by transforming raw reads to read per million per each region for replication analysis

Usage

calculateBatchRPM(object,normalized_method=c("powerlawFittedRPM","normalRPM"))

Arguments

object

r3CseqInBatch object

normalized_method

character. method of normalization (default=powerlawFittedRPM)

See Also

calculateRPM, expRPM contrRPM

Examples

#See the vignette