Developer documentation: model for covariates on misclassification
probabilities
FEV1 measurements from lung transplant recipients
Developer documentation: hidden Markov model structure object
Misclassification probability matrix
Calculate tables of hazard ratios for covariates on transition intensities
Developer documentation: misclassification model structure object
Hidden Markov model constructors
Multivariate hidden Markov models
Extract model log-likelihood
Fitted msm model objects
Extract original data from msm
objects.
Likelihood ratio test
Multi-state Markov and hidden Markov models in continuous time
Measurement error distributions
Developer documentation: internal msm parameters object
Calculate tables of odds ratios for covariates on misclassification
probabilities
Expected first passage time
Extract msm model parameter estimates in compact format
Multi-State Markov and Hidden Markov Models in Continuous Time
Pearson-type goodness-of-fit test
Convert data for `msm' to data for `survival', `mstate' or `flexsurv'
analysis
Parameters of phase-type models in mixture form
Exponential distribution with piecewise-constant rate
Generic function to find quantiles of a distribution
Plots of multi-state models
Developer documentation: transition model structure object
Transition intensity matrix
Estimated ratio of transition intensities
Transition probability matrix for processes with piecewise-constant
intensities
Probability of each state being next
Transition probability matrix
Simulate multiple trajectories from a multi-state Markov model with
arbitrary observation times
Kaplan Meier estimates of incidence
Convert data stored in msm object to old format
Score residuals
Plot of observed and expected prevalences
Calculate the probabilities of underlying states and the most likely path
through them
Coxian phase-type distribution with two phases
Passage probabilities
Tables of observed and expected prevalences
Developer documentation: model for covariates on transition intensities
Psoriatic arthritis data
Update the maximum likelihood estimates in a fitted model object.
Mean sojourn times from a multi-state model
Plot empirical and fitted survival curves
Print a fitted msm model object
Truncated Normal distribution
Print a fitted msm model object
Simulate one individual trajectory from a continuous-time Markov model
Explore the likelihood surface
Simulate from a Markov model fitted using msm
Total length of stay, or expected number of visits
Transient and absorbing states
Table of transitions
Summarise a fitted multi-state model
Developer documentation: censoring model object
Heart transplant monitoring data
Calculate crude initial values for transition intensities
Extract model coefficients
Matrix exponential
Bootstrap resampling for multi-state models
Aortic aneurysm progression data
Bronchiolitis obliterans syndrome after lung transplants
The delta method
Criteria for comparing two multi-state models with nested state spaces