qtl (version 1.38-4)

convert2riself: Convert a cross to RIL by selfing

Description

Convert a cross to type "riself" (RIL by selfing).

Usage

convert2riself(cross)

Arguments

cross

An object of class cross. See read.cross for details.

Value

• The input cross object, with genotype codes possibly changed and cross type changed to "riself".

Details

If there are more genotypes with code 3 (BB) than code 2 (AB), we omit the genotypes with code==2 and call those with code==3 the BB genotypes.

If, instead, there are more genotypes with code 2 than code 3, we omit the genotypes with code==3 and call those with code==2 the BB genotypes.

Any chromosomes with class "X" (X chromosome) are changed to class "A" (autosomal).

See Also

convert2risib

Examples

data(hyper)
hyper.as.riself <- convert2riself(hyper)