cytof_addToFCS: Add data to the original FCS files
Description
Store the new dimension transformed data and cluster data into the exprs
matrix in new fcs files under analyzedFCSdir
Usage
cytof_addToFCS(data, rawFCSdir, analyzedFCSdir, transformed_cols = c("tsne_1", "tsne_2"), cluster_cols = c("cluster"), inLgclTrans = TRUE)
Arguments
data
The new data matrix to be added in.
rawFCSdir
The directory containing the original fcs files.
analyzedFCSdir
The directory to store the new fcs files.
transformed_cols
the column name of the dimension transformend data in data.
cluster_cols
the column name of the cluster data in data.
inLgclTrans
Boolean value decides if apply the inverse lgcl transformation to the data before saving
Value
new fcs files stored under analyzedFCSdir