scmamp (version 0.2.55)

drawAlgorithmGraph: Hypotheses represented as a graph

Description

This function can be used to plot a graph where algorithms are nodes and algorithms that cannot be regarded as different are joined by an edge.

Usage

drawAlgorithmGraph(pvalue.matrix, mean.value, ..., alpha = 0.05, font.size = 15, highlight = "min", highlight.color = "chartreuse3", node.color = "gray30", font.color = "white", digits = 2, node.width = 5, node.height = 2)

Arguments

pvalue.matrix

Matrix with the p-values

mean.value

Vector of values to be written together with the name of the algorithm

...

Additional parameters to the Rgraphviz function. This is mainly to change the layout of the graph

alpha

Significance level to determine which hypotheses are rejected.

font.size

Size of the font for the node labels.

highlight

A character indicating which node has to be highlighted. It can be the one with the maximum value ('max'), the minimum value ('min') or none ('none').

highlight.color

Any R valid color for the highlighted node.

node.color

Any R valid color for the non-highlighted nodes.

font.color

Any R valid color for the node labels.

digits

Number of digits to display the value associated to each node

node.width

Numeric value for the width of the node

node.height

Numeric value for the height of the node

See Also

plotPvalues, plotRanking, plotCD

Examples

data(data_blum_2015)
data <- filterData(data.blum.2015, condition="Size == 1000", remove.cols=1:2)
res <- postHocTest(data, test = "friedman", use.rank=TRUE, correct="bergmann")
## This function requieres the package Rgraphviz
# drawAlgorithmGraph(res$corrected.pval, res$summary)