enumerate_tips_under_edges

phylogenetic tree, class <code><a rd-options="ape" href="/link/phylo?package=PhylogeneticEM&version=1.2.1&to=ape" data-mini-rdoc="ape::phylo">phylo</a></code>.

tree

<code>enumerate_tips_under_edges</code> gives, for each edge of the tree, the labels
of the tips that have this edge as an ancestor.

Implementation of the automatic shift detection method for
Brownian Motion (BM) or Ornstein<e2><80><93>Uhlenbeck (OU) models of trait evolution on
phylogenies. Some tools to handle equivalent shifts configurations are also
available. See Bastide et al. (2017) <doi:10.1111/rssb.12206> and
Bastide et al. (2018) <doi:10.1093/sysbio/syy005>.

Paul Bastide

PhylogeneticEM

Automatic Shift Detection using a Phylogenetic EM

Mahendra Mariadassou

enumerate_tips_under_edges function

phylogenetic tree, class <code><a rd-options='ape' href='phylo'>phylo</a></code>.

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enumerate_tips_under_edges: Tips descendants of nodes.

Description

Usage

Arguments

Value

Details