Learn R Programming
⚠️There's a newer version (1.5.1) of this package.Take me there.

plsRglm (version 0.8.2)

Partial least squares Regression for generalized linear models

Description

This package provides Partial least squares Regression for (weighted) generalized linear models and kfold crossvalidation of such models using various criteria. It allows for missing data in the eXplanatory variables. Bootstrap confidence intervals constructions are also available.

Copy Link

Version

Install

install.packages('plsRglm')

Monthly Downloads

1,018

Version

0.8.2

License

GPL-3

Maintainer

Frederic Bertrand

Last Published

April 10th, 2013

Functions in plsRglm (0.8.2)

kfolds2Chisq

Computes Predicted Chisquare for kfold cross validated partial least squares regression models.
PLS_lm_formula

Partial least squares Regression models with leave one out cross validation
bootpls

Non-parametric Bootstrap for PLS models
AICpls

AIC function for plsR models
bootplsglm

Non-parametric Bootstrap for PLS generalized linear models
XpineNAX21

Missing data analysis for the pine dataset
bordeaux

Quality of wine dataset
kfolds2coeff

Extracts coefficients from kfold cross validated partial least squares regression models
Cornell

Cornell dataset
print.plsRglmmodel

Print method for plsRglm models
print.summary.plsRglmmodel

Print method for summaries of plsRglm models
kfolds2CVinfos_glm

Extracts and computes information criteria and fits statistics for kfold cross validated partial least squares glm models
print.summary.plsRmodel

Print method for summaries of plsR models
coefs.plsRglm

Coefficients for bootstrap computations
plsR

Partial least squares Regression models with leave one out cross validation
aze

Microsat Dataset
kfolds2Mclassedind

Number of missclassified individuals per group for kfold cross validated partial least squares regression models.
PLS_glm_kfoldcv_formula

Partial least squares regression glm models with kfold cross validation
PLS_glm_wvc

Light version of PLS_glm for cross validation purposes
kfolds2Chisqind

Computes individual Predicted Chisquare for kfold cross validated partial least squares regression models.
PLS_lm

Partial least squares Regression models with leave one out cross validation
CorMat

Correlation matrix for simulating plsR datasets
PLS_lm_wvc

Light version of PLS_lm for cross validation purposes
boxplots.bootpls

Boxplot bootstrap distributions
summary.plsRmodel

Summary method for plsR models
PLS_glm_kfoldcv

Partial least squares regression glm models with kfold cross validation
fowlkes

Fowlkes dataset
XbordeauxNA

Missing data analysis for the quality of wine dataset
loglikpls

loglikelihood function for plsR models
aic.dof

Akaike and Bayesian Information Criteria and Generalized minimum description length
summary.plsRglmmodel

Summary method for plsRglm models
kfolds2Mclassed

Number of missclassified individuals for kfold cross validated partial least squares regression models.
aze_compl

As aze without missing values
kfolds2Pressind

Computes individual PRESS for kfold cross validated partial least squares regression models.
plsR.dof

Computation of the Degrees of Freedom
tilt.bootplsglm

Tilted bootstrap for PLS models
simul_data_complete

Data generating detailed process for multivariate plsR models
kfolds2CVinfos_lm

Extracts and computes information criteria and fits statistics for kfold cross validated partial least squares models
signpred

Graphical assessment of the stability of selected variables
PLS_glm

Partial least squares Regression generalized linear models
kfolds2Press

Computes PRESS for kfold cross validated partial least squares regression models.
PLS_lm_kfoldcv

Partial least squares regression models with kfold cross validation
print.plsRmodel

Print method for plsR models
PLS_glm_formula

Partial least squares Regression generalized linear models
dicho

Dichotomization
permcoefs.plsRglm

Coefficients computation for permutation bootstrap
coefs.plsRglmnp

Coefficients for bootstrap computations
permcoefs.plsRglmnp

Coefficients computation for permutation bootstrap
PLS_lm_kfoldcv_formula

Partial least squares regression models with kfold cross validation
coefs.plsR

Coefficients for bootstrap computations
pine_sup

Supplementary data for pine dataset
pine_full

Full pine dataset
plots.confints.bootpls

Plot bootstrap confidence intervals
tilt.bootpls

Tilted bootstrap for PLS models
permcoefs.plsR

Coefficients computation for permutation bootstrap
confints.bootpls

Bootstrap confidence intervals
simul_data_UniYX

Data generating function for univariate plsR models
infcrit.dof

Information criteria
simul_data_UniYX_binom

Data generating function for univariate binomial plsR models
plsRglm

Partial least squares Regression generalized linear models
plsRglm-package

Partial least squares Regression for generalized linear models
simul_data_YX

Data generating function for multivariate plsR models
pine

Pine dataset