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GOSim (version 1.10.0)

filterGO: Filter GO.

Description

Filter out genes from a list not mapping to the actual ontology. Genes not mapping to the currently set ontology ("BP","MF","CC") and not having one of the predefined evidence codes (default is to use all evidence codes) are removed.

Usage

filterGO(genelist)

Arguments

genelist
character vector of Entrez gene IDs

Value

List with items
"genename"
gene ID
"annotation"
character vector of GO terms mapping to the gene within the actual ontology

See Also

setOntology, setEvidenceLevel, getGOInfo, calcICs

Examples

Run this code

	filterGO(c("12345","4559"))	

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