flowCore (version 1.38.2)

filterSummaryList-class: Class "filterSummaryList"

Description

Class and methods to handle summary statistics for from filtering operations on whole flowSets.

Arguments

object

An object of class filterResultList which is to be summarized.

...

Further arguments that are passed to the generic.

Value

An object of class filterSummaryList.

Objects from the Class

Objects are created by calling summary on a link{filterResultList} object. The user doesn't have to deal with manual object instantiation.

Slots

.Data:

Object of class "list". The class directly extends list, and this slot holds the list data.

Extends

Class "list", from data part.

Usage

summary(object, ...)

Methods

toTable

signature(x = "filterSummaryList"): Coerce object to data.frame. Additional factors are added to indicate list items in the original object.

Details

Calling summary on a filterResult object prints summary information on the screen, but also creates objects of class filterSummary for computational access.

See Also

filterResult, filterResultList, logicalFilterResult, multipleFilterResult, flowFrame filterSummary

Examples

## Not run: 
# 
# library(flowStats)
# 
# ## Loading example data, creating and applying a curv1Filter
# data(GvHD)
# dat <- GvHD[1:3]
# c1f <- curv1Filter(filterId="myCurv1Filter", x=list("FSC-H"), bwFac=2)
# fres <- filter(dat, c1f)
# 
# ## creating and showing the summary
# summary(fres)
# s <- summary(fres)
# 
# ## subsetting
# s[[1]]
# 
# ##accessing details
# toTable(s)
# ## End(Not run)