gammaStat

This function computes the gamma-statistic which summarizes the
  information contained in the inter-node intervals of a phylogeny. It
  is assumed that the tree is ultrametric. Note that the function does
  not check that the tree is effectively ultrametric, so if it is not,
  the returned result may not be meaningful.

univar

Ape provides functions for reading, writing, plotting,
  and manipulating phylogenetic trees, analyses of comparative data
  in a phylogenetic framework, analyses of diversification and
  macroevolution, computing distances from allelic and nucleotide
  data, reading nucleotide sequences, and several tools such as
  Mantel's test, computation of minimum spanning tree, the population
  parameter theta based on various approaches, generalized skyline plots,
  estimation of absolute evolutionary rates and clock-like
  trees using non-parametric rate smoothing, conversion of APE trees
  to and from hclust objects and for classifying genes in trees using
  the Klastorin-Misawa-Tajima approach.

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gammaStat: Gamma-Statistic of Pybus and Harvey

Description

Usage

Arguments

Value

Details

References

See Also