methylKit (version 0.9.5)

getContext: get the context of methylation

Description

The function returns the context of methylation. For example: "CpG","CHH" or "CHG"

Usage

getContext(x)

Arguments

x

an methylBase,methylRaw or an methylDiff object

Value

a string for the context methylation

Examples

# NOT RUN {
data(methylKit)

getContext(methylBase.obj)
getContext(methylDiff.obj)
getContext(methylRawList.obj[[1]])
# }