getEmptyImageDimensions

get_empty_dim

Value to check against.  If zero, then 
<code>getEmptyImageDimensions</code> will include any dimension that has 
fewer than <code>threshold</code> zeroes. May be a vector of values, matched with 
<code><a rd-options="" href="/link/match?package=fslr&version=1.9.2.1" data-mini-rdoc="fslr::match">match</a></code>

value

Include dimension if fewer than <code>threshold</code> voxels
are in the slice

threshold

Should image be reoriented if a filename?

reorient


Creates a list of indices of an image that has all irrelevant
values


Wrapper functions that interface with 'FSL' (http://
fsl.fmrib.ox.ac.uk/fsl/fslwiki/), a powerful and commonly-used 'neuroimaging'
software, using system commands. The goal is to be able to interface with 'FSL'
completely in R, where you pass R objects of class 'nifti', implemented by
package 'oro.nifti', and the function executes an 'FSL' command and returns an R
object of class 'nifti' if desired.

John Muschelli

fslr

Wrapper Functions for FSL ('FMRIB' Software Library) from
Functional MRI of the Brain ('FMRIB')

getEmptyImageDimensions function

Value to check against.  If zero, then 
<code>getEmptyImageDimensions</code> will include any dimension that has 
fewer than <code>threshold</code> zeroes. May be a vector of values, matched with 
<code><a rd-options='' href='match'>match</a></code>

getEmptyImageDimensions: Get Empty Image Dimensions

Description

Usage

Arguments

Value