biomartr (version 0.5.9000)

getKingdomAssemblySummary: Retrieve and summarise the assembly_summary.txt files from NCBI for all kingdoms

Description

Retrieval function of the assembly_summary.txt file from NCBI for all kingdoms. The assembly_summary.txt files store available species on NCBI.

Usage

getKingdomAssemblySummary(db)

Arguments

db

database name. E.g. refseq or genbank.

See Also

getSummaryFile, getMetaGenomeSummary

Examples

# NOT RUN {
test <- getKingdomAssemblySummary(db = "refseq")
test
# }