A GRangesList object containing
exons or cds grouped by transcript.
subject
A BSgenome object or a FaFile from which
the sequences will be taken.
...
Additional arguments
Value
A DNAStringSet instance containing the sequences for all transcripts
specified in query.
Details
getTranscriptSeqs is a wrapper for the
extractTranscriptSeqs and getSeq functions. The
purpose is to allow sequence extraction from either a
BSgenome or FaFile. Transcript
sequences are extracted based on the boundaries of the feature
provided in the query (i.e., either exons or cds regions).