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ChemoSpec (version 4.4.97)

groupNcolor: Assign Group Membership and Colors for a Spectra Object

Description

A utility function which looks for gr.crit in the file names of .csv files and assigns group membership (max 8 groups automatically). Also assigns a color, a symbol and an alternate symbol to each group. Warnings are given if there are file names that don't match entries in gr.crit or there are entries in gr.crit that don't match any file names. An internal function, not generally called by the user.

Usage

groupNcolor(spectra, gr.crit = NULL, gr.cols = c("auto"))

Arguments

spectra

An object of S3 class Spectra. Until this function acts on spectra it is not quite complete.

gr.crit
gr.cols

Value

A complete object of S3 class Spectra. This function is the last internal step in creating a Spectra object. Until this function has done its job, an object of class Spectra will not pass checks as the assembly is not complete (see chkSpectra).

References

https://github.com/bryanhanson/ChemoSpec

See Also

files2SpectraObject for details; sumGroups to see the outcome.