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HilbertCurve (version 1.2.2)

hc_points-GenomicHilbertCurve-method: Add points to the Hilbert curve

Description

Add points to the Hilbert curve

Usage

## S3 method for class 'GenomicHilbertCurve':
hc_points(object, gr,
    np = max(c(2, 10 - hc_level(object))), size = unit(1, "char"),
    pch = 1, gp = gpar(), mean_mode = c("w0", "absolute", "weighted"),
    shape = "circle")

Arguments

object
a GenomicHilbertCurve-class object
gr
a GRanges object which contains the genomic regions to be mapped to the curve
np
pass to hc_points,HilbertCurve-method
size
size of points when np <= 1<="" code="">, pass to hc_points,HilbertCurve-method
pch
shape of the points when np <= 1<="" code="">, pass to hc_points,HilbertCurve-method
gp
graphic parameters of the points when np <= 1<="" code="">, pass to hc_points,HilbertCurve-method
mean_mode
pass to hc_points,HilbertCurve-method
shape
shape of the points when np >= 2, pass to hc_points,HilbertCurve-method

Value

Details

It is basically a wrapper of hc_points,HilbertCurve-method.

Examples

Run this code
require(circlize)
bed = generateRandomBed(nr = 100)
gr = GRanges(seqnames = bed[[1]], ranges = IRanges(bed[[2]], bed[[3]]))
hc = GenomicHilbertCurve()
hc_points(hc, gr, gp = gpar(fill = rand_color(length(gr))))

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