mclust (version 3.4.7)

hclass: Classifications from Hierarchical Agglomeration

Description

Determines the classifications corresponding to different numbers of groups given merge pairs from hierarchical agglomeration.

Usage

hclass(hcPairs, G)

Arguments

hcPairs

A numeric two-column matrix in which the ith row gives the minimum index for observations in each of the two clusters merged at the ith stage of agglomerative hierarchical clustering.

G

An integer or vector of integers giving the number of clusters for which the corresponding classfications are wanted.

Value

• A matrix with length(G) columns, each column corresponding to a classification. Columns are indexed by the character representation of the integers in G.

References

C. Fraley and A. E. Raftery (2006). MCLUST Version 3 for R: Normal Mixture Modeling and Model-Based Clustering, Technical Report no. 504, Department of Statistics, University of Washington.

See Also

hc, hcE

Examples

hcTree <- hc(modelName="VVV", data = iris[,-5])
cl <- hclass(hcTree,c(2,3))

par(pty = "s", mfrow = c(1,1))
clPairs(iris[,-5],cl=cl[,"2"])
clPairs(iris[,-5],cl=cl[,"3"])