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HIBAG (version 1.8.3)

hlaAlleleClass: Class of HLA Type

Description

The definition of a class for HLA types, returned from hlaAllele.

Arguments

Value

There are following components:
locus
HLA locus
pos.start
the starting position in basepair
pos.end
the end position in basepair
value
a data frame
assembly
the human genome reference, such like "hg19"
postprob
if applicable, a matrix of all posterior probabilities
~The component value includes:
sample.id
sample ID
allele1
HLA allele
allele2
HLA allele
prob
if applicable, the posterior probability

See Also

hlaAllele