hmp_otus

<p>A subset of the Human Microbiome Project abundance matrix produced by QIIME.
It contains OTU ids, taxonomic lineages, and the read counts for 50 samples.
See <code><a rd-options="" href="/link/hmp_samples?package=metacoder&version=0.3.0.1" data-mini-rdoc="metacoder::hmp_samples">hmp_samples</a></code> for the matching dataset of sample information.</p>

data

A set of tools for parsing, manipulating, and graphing data
classified by a hierarchy (e.g. a taxonomy).

Zachary Foster

metacoder

Tools for Parsing, Manipulating, and Graphing Taxonomic
Abundance Data

Niklaus Grunwald

Rob Gilmore

hmp_otus function

Format

<p>A subset of the Human Microbiome Project abundance matrix produced by QIIME.
It contains OTU ids, taxonomic lineages, and the read counts for 50 samples.
See <code><a rd-options='' href='hmp_samples'>hmp_samples</a></code> for the matching dataset of sample information.</p>

hmp_otus: A HMP subset

Description

Arguments

Format

Details

See Also